CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1496 rna-evm.model.Chr13.1496 Chr13 44245040 44249099 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1497 rna-evm.model.Chr13.1497 Chr13 44251567 44255043 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1498 rna-evm.model.Chr13.1498 Chr13 44258227 44273434 PREDICTED: Alkaline ceramidase 3 GO:0006672;GO:0016020;GO:0016811 K04711
gene-evm.TU.Chr13.1499 rna-evm.model.Chr13.1499 Chr13 44368136 44369597 uncharacterized protein nan K21819
gene-evm.TU.Chr13.150 rna-evm.model.Chr13.150 Chr13 4424545 4441610 PREDICTED: Methanethiol oxidase GO:0008430 K17285
gene-evm.TU.Chr13.1500 rna-evm.model.Chr13.1500 Chr13 44550762 44671097 PREDICTED: Schwannomin-interacting protein 1 GO:0005515 K24833
gene-evm.TU.Chr13.1502 rna-evm.model.Chr13.1502 Chr13 44716350 44717741 uncharacterized protein nan K09721
gene-evm.TU.Chr13.1503 rna-evm.model.Chr13.1503 Chr13 44717900 44757160 uncharacterized protein nan K12782
gene-evm.TU.Chr13.1504 rna-evm.model.Chr13.1504.1 Chr13 44793551 44946316 PREDICTED: Inositol 1,4,5-trisphosphate receptor type 3 GO:0005220;GO:0005262;GO:0005783;GO:0006816;GO:0016020;GO:0070588;GO:0070679 K04960
gene-evm.TU.Chr13.1505 rna-evm.model.Chr13.1505 Chr13 44986183 44987622 uncharacterized protein nan K27298

For more detailed data, you can explore the Download section to access the full dataset.