CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1484 rna-evm.model.Chr13.1484 Chr13 44113436 44114566 PREDICTED: sentrin-specific protease 1 [EC:3.4.22.68] nan nan
gene-evm.TU.Chr13.1487 rna-evm.model.Chr13.1487 Chr13 44146081 44152846 uncharacterized protein nan K24710
gene-evm.TU.Chr13.1488 rna-evm.model.Chr13.1488 Chr13 44160570 44162798 PREDICTED: tumor necrosis factor ligand superfamily member 14 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1489 rna-evm.model.Chr13.1489 Chr13 44168152 44175527 uncharacterized protein GO:0005164;GO:0006955;GO:0016020 K03161
gene-evm.TU.Chr13.1490 rna-evm.model.Chr13.1490 Chr13 44183365 44188594 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1491 rna-evm.model.Chr13.1491 Chr13 44193246 44196939 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1492 rna-evm.model.Chr13.1492 Chr13 44202696 44215017 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1493 rna-evm.model.Chr13.1493 Chr13 44225560 44228079 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1494 rna-evm.model.Chr13.1494 Chr13 44235159 44236450 PREDICTED: Tumor necrosis factor ligand superfamily member 15 GO:0005164;GO:0006955;GO:0016020 K05478
gene-evm.TU.Chr13.1495 rna-evm.model.Chr13.1495 Chr13 44241165 44243731 PREDICTED: tumor necrosis factor ligand superfamily member 10 GO:0005164;GO:0006955;GO:0016020 K04389

For more detailed data, you can explore the Download section to access the full dataset.