CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1390 rna-evm.model.Chr13.1390 Chr13 41746667 41762504 PREDICTED: Sodium/potassium-transporting ATPase subunit beta GO:0005890;GO:0006813;GO:0006814 K01540
gene-evm.TU.Chr13.1391 rna-evm.model.Chr13.1391 Chr13 41768476 41782353 PREDICTED: Eukaryotic initiation factor 4A-II GO:0003676;GO:0005524 K03257
gene-evm.TU.Chr13.1392 rna-evm.model.Chr13.1392 Chr13 41784162 41800385 PREDICTED: Glutathione reductase, mitochondrial GO:0004362;GO:0006749;GO:0016491;GO:0045454;GO:0050660;GO:0050661;GO:0055114 K00383
gene-evm.TU.Chr13.1394 rna-evm.model.Chr13.1394 Chr13 41808714 41831298 PREDICTED: Monocarboxylate transporter 12 GO:0016020;GO:0055085 K08181
gene-evm.TU.Chr13.1395 rna-evm.model.Chr13.1395 Chr13 41848883 41853122 PREDICTED: vomeronasal 2 receptor GO:0003677;GO:0015074 K04763
gene-evm.TU.Chr13.1399 rna-evm.model.Chr13.1399 Chr13 41910364 41912668 PREDICTED: Monocarboxylate transporter 12 GO:0016020;GO:0055085 K08181
gene-evm.TU.Chr13.140 rna-evm.model.Chr13.140 Chr13 4029939 4041754 PREDICTED: Sodium-dependent multivitamin transporter GO:0016020;GO:0022857;GO:0055085 K14386
gene-evm.TU.Chr13.1400 rna-evm.model.Chr13.1400 Chr13 41920529 41924113 PREDICTED: Monocarboxylate transporter 12 GO:0016020;GO:0055085 K08181
gene-evm.TU.Chr13.1401 rna-evm.model.Chr13.1401 Chr13 41935851 41948423 PREDICTED: Dimethylaniline monooxygenase [N-oxide-forming] 5 GO:0004499;GO:0050660;GO:0050661;GO:0055114 K00485
gene-evm.TU.Chr13.1403 rna-evm.model.Chr13.1403 Chr13 41984157 41987070 PREDICTED: Sodium-dependent noradrenaline transporter GO:0016020 K05038

For more detailed data, you can explore the Download section to access the full dataset.