CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1332 rna-evm.model.Chr13.1332 Chr13 39875751 39877166 PREDICTED: Octopressin receptor GO:0004930;GO:0007186;GO:0016020 K04194
gene-evm.TU.Chr13.1333 rna-evm.model.Chr13.1333 Chr13 39881738 39900959 PREDICTED: Fibropellin-1 GO:0005509 K20994
gene-evm.TU.Chr13.1334 rna-evm.model.Chr13.1334 Chr13 39912484 39941527 PREDICTED: Neurogenic locus Notch protein GO:0005509 K20994
gene-evm.TU.Chr13.1335 rna-evm.model.Chr13.1335 Chr13 39966980 39969122 PREDICTED: beta-microseminoprotein-like nan K25684
gene-evm.TU.Chr13.1336 rna-evm.model.Chr13.1336 Chr13 39973591 39975284 PREDICTED: beta-microseminoprotein-like nan K25684
gene-evm.TU.Chr13.1337 rna-evm.model.Chr13.1337 Chr13 39982759 39984331 PREDICTED: beta-microseminoprotein-like nan K25684
gene-evm.TU.Chr13.1338 rna-evm.model.Chr13.1338 Chr13 39999308 40069034 PREDICTED: von Willebrand factor D and EGF domain-containing protein nan K02415
gene-evm.TU.Chr13.1339 rna-evm.model.Chr13.1339 Chr13 40074576 40106972 PREDICTED: importin-4 nan K03137
gene-evm.TU.Chr13.134 rna-evm.model.Chr13.134 Chr13 3936032 3938166 uncharacterized protein nan K20196
gene-evm.TU.Chr13.1341 rna-evm.model.Chr13.1341 Chr13 40136148 40145541 PREDICTED: interleukin 1 receptor accessory protein-like GO:0005515;GO:0007165 K05170

For more detailed data, you can explore the Download section to access the full dataset.