CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1276 rna-evm.model.Chr13.1276 Chr13 38249094 38256029 PREDICTED: Calcium-activated chloride channel regulator 1 nan K05027
gene-evm.TU.Chr13.1278 rna-evm.model.Chr13.1278 Chr13 38288612 38295156 PREDICTED: Carbohydrate sulfotransferase 15 nan K08106
gene-evm.TU.Chr13.1279 rna-evm.model.Chr13.1279 Chr13 38297638 38308243 PREDICTED: Excitatory amino acid transporter 1 GO:0015293;GO:0016020 K05613
gene-evm.TU.Chr13.128 rna-evm.model.Chr13.128 Chr13 3790574 3791653 PREDICTED: alpha-2-macroglobulin nan nan
gene-evm.TU.Chr13.1281 rna-evm.model.Chr13.1281 Chr13 38328775 38330453 uncharacterized protein nan K20480
gene-evm.TU.Chr13.1282 rna-evm.model.Chr13.1282 Chr13 38333810 38380153 PREDICTED: Rho guanine nucleotide exchange factor 7 GO:0005085;GO:0005515;GO:0035023 K13710
gene-evm.TU.Chr13.1283 rna-evm.model.Chr13.1283 Chr13 38390682 38397183 PREDICTED: Histidine triad nucleotide-binding protein 3 GO:0003824 K12150
gene-evm.TU.Chr13.1284 rna-evm.model.Chr13.1284 Chr13 38399610 38401237 PREDICTED: Aldo-keto reductase family 1 member A1 GO:0016491;GO:0055114 K00011
gene-evm.TU.Chr13.1285 rna-evm.model.Chr13.1285 Chr13 38405496 38413976 PREDICTED: Elongation factor 1-alpha 1 GO:0003924;GO:0005525 K03231
gene-evm.TU.Chr13.1287 rna-evm.model.Chr13.1287 Chr13 38439887 38444081 uncharacterized protein nan K05468

For more detailed data, you can explore the Download section to access the full dataset.