CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1320 rna-evm.model.Chr13.1320 Chr13 39430382 39452751 PREDICTED: zinc finger protein DZIP1 nan K16470
gene-evm.TU.Chr13.1322 rna-evm.model.Chr13.1322 Chr13 39458804 39470469 uncharacterized protein nan nan
gene-evm.TU.Chr13.1323 rna-evm.model.Chr13.1323 Chr13 39555518 39561074 PREDICTED: Perlucin nan K06468
gene-evm.TU.Chr13.1324 rna-evm.model.Chr13.1324 Chr13 39573377 39574363 uncharacterized protein nan K22410
gene-evm.TU.Chr13.1326 rna-evm.model.Chr13.1326 Chr13 39592902 39593507 PREDICTED: solute carrier family 15, member 5 nan nan
gene-evm.TU.Chr13.1327 rna-evm.model.Chr13.1327 Chr13 39603623 39770473 PREDICTED: Calcium-activated chloride channel regulator 4A nan K05027
gene-evm.TU.Chr13.1329 rna-evm.model.Chr13.1329 Chr13 39800851 39813111 PREDICTED: Calcium-activated chloride channel regulator 4A nan K05027
gene-evm.TU.Chr13.133 rna-evm.model.Chr13.133 Chr13 3923700 3935159 uncharacterized protein nan nan
gene-evm.TU.Chr13.1330 rna-evm.model.Chr13.1330 Chr13 39818891 39821474 PREDICTED: Tripartite motif-containing protein 2 nan K12026
gene-evm.TU.Chr13.1331 rna-evm.model.Chr13.1331 Chr13 39824302 39867378 PREDICTED: Sodium/hydrogen exchanger 9 GO:0006812;GO:0006814;GO:0006885;GO:0015299;GO:0015385;GO:0016020;GO:0055085 K12041

For more detailed data, you can explore the Download section to access the full dataset.