CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1266 rna-evm.model.Chr13.1266 Chr13 38036935 38044096 PREDICTED: Cyclin-C GO:0016538;GO:0016592 K15161
gene-evm.TU.Chr13.1267 rna-evm.model.Chr13.1267 Chr13 38045662 38052211 uncharacterized protein nan K16923
gene-evm.TU.Chr13.1268 rna-evm.model.Chr13.1268 Chr13 38056737 38083288 PREDICTED: Calcium-activated chloride channel regulator 4 nan K05027
gene-evm.TU.Chr13.1269 rna-evm.model.Chr13.1269 Chr13 38096118 38096504 PREDICTED: Putative nuclease HARBI1 nan K23222
gene-evm.TU.Chr13.127 rna-evm.model.Chr13.127 Chr13 3787461 3789832 PREDICTED: Integrase/recombinase xerD homolog nan K04763
gene-evm.TU.Chr13.1270 rna-evm.model.Chr13.1270 Chr13 38110397 38111035 PREDICTED: 14-3-3 protein beta/alpha-1 GO:0019904 K06630
gene-evm.TU.Chr13.1271 rna-evm.model.Chr13.1271 Chr13 38117317 38146182 PREDICTED: Run domain Beclin-1-interacting and cysteine-rich domain-containing protein nan K19330
gene-evm.TU.Chr13.1272 rna-evm.model.Chr13.1272 Chr13 38167430 38176470 uncharacterized protein nan nan
gene-evm.TU.Chr13.1274 rna-evm.model.Chr13.1274 Chr13 38228323 38235906 PREDICTED: Monocarboxylate transporter 14 nan K08187
gene-evm.TU.Chr13.1275 rna-evm.model.Chr13.1275 Chr13 38242155 38247998 PREDICTED: Calcium-activated chloride channel regulator 1 nan K05027

For more detailed data, you can explore the Download section to access the full dataset.