CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1050 rna-evm.model.Chr13.1050 Chr13 31131185 31134906 PREDICTED: LHFPL tetraspan subfamily member 6 protein nan K23893
gene-evm.TU.Chr13.1051 rna-evm.model.Chr13.1051 Chr13 31163129 31165995 uncharacterized protein nan K17834
gene-evm.TU.Chr13.1052 rna-evm.model.Chr13.1052 Chr13 31167865 31170835 PREDICTED: LHFPL tetraspan subfamily member 6 protein nan K23893
gene-evm.TU.Chr13.1053 rna-evm.model.Chr13.1053 Chr13 31190066 31197679 PREDICTED: Monocarboxylate transporter 12 GO:0016020;GO:0055085 K08186
gene-evm.TU.Chr13.1054 rna-evm.model.Chr13.1054 Chr13 31199487 31220247 uncharacterized protein nan K01138
gene-evm.TU.Chr13.1055 rna-evm.model.Chr13.1055 Chr13 31235486 31290365 PREDICTED: Centrosomal protein of 295 kDa nan K26251
gene-evm.TU.Chr13.1056 rna-evm.model.Chr13.1056 Chr13 31293825 31325277 PREDICTED: Structural maintenance of chromosomes protein 4 GO:0005515;GO:0005524;GO:0005694;GO:0051276 K06675
gene-evm.TU.Chr13.1057 rna-evm.model.Chr13.1057 Chr13 31333852 31345448 PREDICTED: NFX1-type zinc finger-containing protein 1 GO:0003700;GO:0005634;GO:0006355;GO:0008270 K11701
gene-evm.TU.Chr13.1058 rna-evm.model.Chr13.1058 Chr13 31354413 31355430 PREDICTED: NFX1-type zinc finger-containing protein 1 nan K22754
gene-evm.TU.Chr13.1059 rna-evm.model.Chr13.1059 Chr13 31360833 31363533 PREDICTED: NFX1-type zinc finger-containing protein 1 nan K11701

For more detailed data, you can explore the Download section to access the full dataset.