CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1005 rna-evm.model.Chr13.1005 Chr13 29361083 29425212 PREDICTED: Mannose-P-dolichol utilization defect 1 protein GO:0005509 K09660
gene-evm.TU.Chr13.1006 rna-evm.model.Chr13.1006 Chr13 29518248 29694863 PREDICTED: Death-associated inhibitor of apoptosis 2 nan K16060
gene-evm.TU.Chr13.1007 rna-evm.model.Chr13.1007 Chr13 29694682 29703963 PREDICTED: MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 3 nan K16060
gene-evm.TU.Chr13.1008 rna-evm.model.Chr13.1008 Chr13 29724364 29735075 PREDICTED: Death-associated inhibitor of apoptosis 2 nan K16060
gene-evm.TU.Chr13.101 rna-evm.model.Chr13.101 Chr13 2867549 2878844 PREDICTED: exocyst complex component 1 nan nan
gene-evm.TU.Chr13.1010 rna-evm.model.Chr13.1010 Chr13 29765995 29770361 uncharacterized protein nan K03098
gene-evm.TU.Chr13.1011 rna-evm.model.Chr13.1011 Chr13 29793544 29795606 uncharacterized protein nan K03098
gene-evm.TU.Chr13.1012 rna-evm.model.Chr13.1012 Chr13 29805752 29813370 uncharacterized protein nan K16381
gene-evm.TU.Chr13.1013 rna-evm.model.Chr13.1013 Chr13 29818036 29825073 uncharacterized protein nan K07674
gene-evm.TU.Chr13.1014 rna-evm.model.Chr13.1014 Chr13 29831194 29872648 PREDICTED: Laminin subunit gamma-1 GO:0005576;GO:0006030;GO:0008061 K06675

For more detailed data, you can explore the Download section to access the full dataset.