CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1015 rna-evm.model.Chr13.1015 Chr13 29879830 29903091 PREDICTED: Zonadhesin nan K06789
gene-evm.TU.Chr13.1017 rna-evm.model.Chr13.1017 Chr13 29922540 29952222 PREDICTED: Glutamate carboxypeptidase 2 nan K01301
gene-evm.TU.Chr13.1019 rna-evm.model.Chr13.1019 Chr13 30002631 30079358 PREDICTED: Dynein heavy chain 2, axonemal GO:0005524 K10408
gene-evm.TU.Chr13.1020 rna-evm.model.Chr13.1020 Chr13 30092934 30098076 PREDICTED: myosin heavy chain nan nan
gene-evm.TU.Chr13.1023 rna-evm.model.Chr13.1023 Chr13 30181269 30184862 PREDICTED: vomeronasal 2 receptor nan K04763
gene-evm.TU.Chr13.1025 rna-evm.model.Chr13.1025 Chr13 30206808 30208905 PREDICTED: uncharacterized protein nan K11724
gene-evm.TU.Chr13.1026 rna-evm.model.Chr13.1026 Chr13 30211810 30218007 PREDICTED: Divergent protein kinase domain 2A nan K25757
gene-evm.TU.Chr13.1027 rna-evm.model.Chr13.1027 Chr13 30224544 30253147 PREDICTED: GRIP and coiled-coil domain-containing protein 2 nan K20282
gene-evm.TU.Chr13.1028 rna-evm.model.Chr13.1028 Chr13 30286455 30287239 uncharacterized protein nan K10135
gene-evm.TU.Chr13.1029 rna-evm.model.Chr13.1029 Chr13 30306162 30308009 PREDICTED: Jerky protein homolog-like GO:0003676 K10750

For more detailed data, you can explore the Download section to access the full dataset.