CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.415 rna-evm.model.Chr12.415 Chr12 11620781 11625970 PREDICTED: tripartite motif-containing protein 71 [EC:2.3.2.27] nan K10642
gene-evm.TU.Chr12.417 rna-evm.model.Chr12.417 Chr12 11642809 11674877 PREDICTED: tripartite motif-containing protein 71 [EC:2.3.2.27] nan K10642
gene-evm.TU.Chr12.418 rna-evm.model.Chr12.418 Chr12 11815690 11816053 PREDICTED: solute carrier family 15, member 5 nan K11399
gene-evm.TU.Chr12.419 rna-evm.model.Chr12.419 Chr12 11849151 11849473 PREDICTED: histone-lysine N-methyltransferase SETMAR-like nan nan
gene-evm.TU.Chr12.42 rna-evm.model.Chr12.42 Chr12 1487590 1488486 uncharacterized protein nan K23489
gene-evm.TU.Chr12.420 rna-evm.model.Chr12.420 Chr12 12026667 12038973 PREDICTED: Calcitonin gene-related peptide type 1 receptor GO:0004888;GO:0004930;GO:0007166;GO:0007186;GO:0016020;GO:0016020 K04577
gene-evm.TU.Chr12.421 rna-evm.model.Chr12.421 Chr12 12112880 12113600 uncharacterized protein nan nan
gene-evm.TU.Chr12.424 rna-evm.model.Chr12.424 Chr12 12327007 12334706 PREDICTED: tensin nan K12047
gene-evm.TU.Chr12.425 rna-evm.model.Chr12.425 Chr12 12342394 12347652 PREDICTED: Solute carrier family 23 member 2 GO:0016020;GO:0022857;GO:0055085 K14611
gene-evm.TU.Chr12.428 rna-evm.model.Chr12.428 Chr12 12351828 12387012 PREDICTED: Solute carrier family 23 member 2 GO:0016020;GO:0022857;GO:0055085 K14611

For more detailed data, you can explore the Download section to access the full dataset.