CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.323 rna-evm.model.Chr12.323 Chr12 8867145 8867970 PREDICTED: Zinc finger protein 320 GO:0003676 K09191
gene-evm.TU.Chr12.328 rna-evm.model.Chr12.328 Chr12 8962131 8963017 uncharacterized protein nan nan
gene-evm.TU.Chr12.329 rna-evm.model.Chr12.329 Chr12 8963046 8963462 uncharacterized protein GO:0003677;GO:0006313;GO:0015074 K07499
gene-evm.TU.Chr12.33 rna-evm.model.Chr12.33 Chr12 1282839 1303091 PREDICTED: Parathyroid hormone/parathyroid hormone-related peptide receptor GO:0004888;GO:0004930;GO:0007166;GO:0007186;GO:0016020;GO:0016020 K04585
gene-evm.TU.Chr12.332 rna-evm.model.Chr12.332 Chr12 9026513 9026986 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K25981
gene-evm.TU.Chr12.334 rna-evm.model.Chr12.334 Chr12 9094222 9097074 PREDICTED: fibrillin 2/3 nan K10735
gene-evm.TU.Chr12.336 rna-evm.model.Chr12.336 Chr12 9137564 9151012 uncharacterized protein nan K25470
gene-evm.TU.Chr12.338 rna-evm.model.Chr12.338 Chr12 9158589 9173339 uncharacterized protein nan nan
gene-evm.TU.Chr12.339 rna-evm.model.Chr12.339 Chr12 9206361 9220609 uncharacterized protein nan nan
gene-evm.TU.Chr12.34 rna-evm.model.Chr12.34 Chr12 1355808 1356467 PREDICTED: Zinc finger protein 41 GO:0003676 K22534

For more detailed data, you can explore the Download section to access the full dataset.