CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.2050 rna-evm.model.Chr12.2050 Chr12 67514467 67524735 uncharacterized protein GO:0008083 K22688
gene-evm.TU.Chr12.2053 rna-evm.model.Chr12.2053 Chr12 67590037 67595907 PREDICTED: Cation-dependent mannose-6-phosphate receptor nan K10089
gene-evm.TU.Chr12.2054 rna-evm.model.Chr12.2054 Chr12 67598266 67599420 PREDICTED: Complement C1q tumor necrosis factor-related protein 3 nan K24236
gene-evm.TU.Chr12.2055 rna-evm.model.Chr12.2055 Chr12 67620835 67621974 PREDICTED: Probable G-protein coupled receptor B0563.6 GO:0004930;GO:0007186;GO:0016020 K26201
gene-evm.TU.Chr12.2057 rna-evm.model.Chr12.2057 Chr12 67668866 67677946 PREDICTED: COMM domain-containing protein 10 nan K22566
gene-evm.TU.Chr12.206 rna-evm.model.Chr12.206 Chr12 6177027 6182530 uncharacterized protein GO:0006629;GO:0016627 K12343
gene-evm.TU.Chr12.2061 rna-evm.model.Chr12.2061 Chr12 67869132 67872211 PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D GO:0003676 nan
gene-evm.TU.Chr12.2063 rna-evm.model.Chr12.2063 Chr12 67947580 67947942 PREDICTED: intraflagellar transport protein 88 nan nan
gene-evm.TU.Chr12.2064 rna-evm.model.Chr12.2064 Chr12 67959033 67960172 PREDICTED: Probable G-protein coupled receptor B0563.6 GO:0004930;GO:0007186;GO:0016020 K26201
gene-evm.TU.Chr12.2065 rna-evm.model.Chr12.2065 Chr12 67965658 67982823 PREDICTED: Complement C1q tumor necrosis factor-related protein 3 nan K24236

For more detailed data, you can explore the Download section to access the full dataset.