CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1916 rna-evm.model.Chr12.1916 Chr12 62071984 62081815 PREDICTED: Kinetochore protein Spc25 nan K11550
gene-evm.TU.Chr12.1917 rna-evm.model.Chr12.1917 Chr12 62086204 62091111 PREDICTED: 14-3-3-like protein 1 GO:0019904 K16197
gene-evm.TU.Chr12.1918 rna-evm.model.Chr12.1918 Chr12 62094526 62110442 PREDICTED: Cilia- and flagella-associated protein 69 nan K24227
gene-evm.TU.Chr12.1919 rna-evm.model.Chr12.1919 Chr12 62118767 62119658 uncharacterized protein nan nan
gene-evm.TU.Chr12.192 rna-evm.model.Chr12.192 Chr12 5753357 5766146 uncharacterized protein nan K20694
gene-evm.TU.Chr12.1920 rna-evm.model.Chr12.1920 Chr12 62121609 62128255 uncharacterized protein nan nan
gene-evm.TU.Chr12.1921 rna-evm.model.Chr12.1921 Chr12 62138497 62148671 PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B nan nan
gene-evm.TU.Chr12.1923 rna-evm.model.Chr12.1923 Chr12 62165236 62177983 uncharacterized protein nan K04846
gene-evm.TU.Chr12.1925 rna-evm.model.Chr12.1925 Chr12 62208384 62213369 uncharacterized protein nan K05122
gene-evm.TU.Chr12.1927_evm.TU.Chr12.1926 rna-evm.model.Chr12.1927_evm.model.Chr12.1926 Chr12 62233440 62429153 PREDICTED: RNA-binding motif, single-stranded-interacting protein 1 GO:0003676;GO:0003723 K24990

For more detailed data, you can explore the Download section to access the full dataset.