CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1863 rna-evm.model.Chr12.1863 Chr12 60042256 60046432 uncharacterized protein nan K08228
gene-evm.TU.Chr12.1864 rna-evm.model.Chr12.1864 Chr12 60048083 60050929 uncharacterized protein nan nan
gene-evm.TU.Chr12.1865 rna-evm.model.Chr12.1865 Chr12 60056120 60060608 uncharacterized protein nan K06790
gene-evm.TU.Chr12.1866 rna-evm.model.Chr12.1866 Chr12 60070322 60073247 PREDICTED: eukaryotic translation initiation factor 2C nan nan
gene-evm.TU.Chr12.1867 rna-evm.model.Chr12.1867 Chr12 60076399 60080786 uncharacterized protein nan K01118
gene-evm.TU.Chr12.1868 rna-evm.model.Chr12.1868 Chr12 60127673 60127984 uncharacterized protein nan K09141
gene-evm.TU.Chr12.1869 rna-evm.model.Chr12.1869 Chr12 60131435 60251189 PREDICTED: Plexin domain-containing protein 2 nan K06821
gene-evm.TU.Chr12.187 rna-evm.model.Chr12.187 Chr12 5695388 5714931 PREDICTED: von Willebrand factor C domain-containing protein 2-like nan K24521
gene-evm.TU.Chr12.1870 rna-evm.model.Chr12.1870 Chr12 60247339 60256148 uncharacterized protein nan K21143
gene-evm.TU.Chr12.1872 rna-evm.model.Chr12.1872 Chr12 60273660 60300529 PREDICTED: trichohyalin-like nan K11580

For more detailed data, you can explore the Download section to access the full dataset.