CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1826 rna-evm.model.Chr12.1826 Chr12 58766423 58808735 PREDICTED: Uncharacterized protein L446 GO:0005509;GO:0006629 K07001
gene-evm.TU.Chr12.1828 rna-evm.model.Chr12.1828 Chr12 58871705 58871993 uncharacterized protein nan K19440
gene-evm.TU.Chr12.183 rna-evm.model.Chr12.183 Chr12 5663385 5667055 uncharacterized protein nan nan
gene-evm.TU.Chr12.1831 rna-evm.model.Chr12.1831 Chr12 58894542 58984635 PREDICTED: M-phase inducer phosphatase GO:0004725;GO:0006470;GO:1902751 K05866
gene-evm.TU.Chr12.1832 rna-evm.model.Chr12.1832 Chr12 58989942 59006485 PREDICTED: Polycomb complex protein BMI-1-B nan K11459
gene-evm.TU.Chr12.1833 rna-evm.model.Chr12.1833 Chr12 59057674 59088244 PREDICTED: Polycomb complex protein BMI-1 nan K11459
gene-evm.TU.Chr12.1834 rna-evm.model.Chr12.1834 Chr12 59110063 59115311 uncharacterized protein nan K10958
gene-evm.TU.Chr12.1835 rna-evm.model.Chr12.1835.1 Chr12 59126582 59164138 PREDICTED: Polycomb complex protein BMI-1 nan K11459
gene-evm.TU.Chr12.1837 rna-evm.model.Chr12.1837 Chr12 59188320 59190902 uncharacterized protein nan K11276
gene-evm.TU.Chr12.1838 rna-evm.model.Chr12.1838 Chr12 59202781 59205054 uncharacterized protein nan K20481

For more detailed data, you can explore the Download section to access the full dataset.