CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1762 rna-evm.model.Chr12.1762 Chr12 56016662 56020755 PREDICTED: Mariner Mos1 transposase nan K07494
gene-evm.TU.Chr12.1763 rna-evm.model.Chr12.1763 Chr12 56093182 56096772 uncharacterized protein nan nan
gene-evm.TU.Chr12.1764 rna-evm.model.Chr12.1764 Chr12 56119519 56120697 uncharacterized protein nan nan
gene-evm.TU.Chr12.1766 rna-evm.model.Chr12.1766 Chr12 56195366 56196544 PREDICTED: Uracil nucleotide/cysteinyl leukotriene receptor GO:0004930;GO:0007186;GO:0016020 K05053
gene-evm.TU.Chr12.1767 rna-evm.model.Chr12.1767 Chr12 56473012 56527224 PREDICTED: Neuronal acetylcholine receptor subunit alpha-10 GO:0004888;GO:0005216;GO:0005230;GO:0006811;GO:0016020;GO:0022848;GO:0034220;GO:0045211 K05312
gene-evm.TU.Chr12.1768 rna-evm.model.Chr12.1768 Chr12 56558125 56566177 uncharacterized protein nan nan
gene-evm.TU.Chr12.1769 rna-evm.model.Chr12.1769 Chr12 56566225 56570321 uncharacterized protein nan K21240
gene-evm.TU.Chr12.1770 rna-evm.model.Chr12.1770 Chr12 56573050 56605027 PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog GO:0008168 K15430
gene-evm.TU.Chr12.1771 rna-evm.model.Chr12.1771 Chr12 56609126 56624368 PREDICTED: Wolframin nan K14020
gene-evm.TU.Chr12.1772 rna-evm.model.Chr12.1772 Chr12 56630046 56633437 uncharacterized protein nan K24191

For more detailed data, you can explore the Download section to access the full dataset.