CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1752 rna-evm.model.Chr12.1752 Chr12 55654957 55656349 PREDICTED: p24 family protein gamma-2 nan nan
gene-evm.TU.Chr12.1753 rna-evm.model.Chr12.1753 Chr12 55656389 55657277 PREDICTED: odorant receptor nan K07488
gene-evm.TU.Chr12.1754 rna-evm.model.Chr12.1754 Chr12 55689050 55694828 uncharacterized protein nan K23896
gene-evm.TU.Chr12.1755 rna-evm.model.Chr12.1755 Chr12 55706476 55709653 uncharacterized protein nan K13044
gene-evm.TU.Chr12.1756 rna-evm.model.Chr12.1756 Chr12 55723405 55734905 PREDICTED: cAMP-dependent protein kinase regulator nan K14676
gene-evm.TU.Chr12.1757 rna-evm.model.Chr12.1757 Chr12 55735334 55740204 uncharacterized protein nan nan
gene-evm.TU.Chr12.1758 rna-evm.model.Chr12.1758 Chr12 55764261 55796193 PREDICTED: Protein boule-like GO:0003676;GO:0003729;GO:0007281 K24979
gene-evm.TU.Chr12.176 rna-evm.model.Chr12.176 Chr12 5564466 5574205 PREDICTED: Transmembrane protein 19 GO:0016020 K04070
gene-evm.TU.Chr12.1760 rna-evm.model.Chr12.1760 Chr12 55946274 55959066 PREDICTED: Zinc finger protein 239 GO:0003676 K09191
gene-evm.TU.Chr12.1761 rna-evm.model.Chr12.1761 Chr12 55962156 55989316 PREDICTED: Autophagy-related protein 9A GO:0006914 K17907

For more detailed data, you can explore the Download section to access the full dataset.