CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.172 rna-evm.model.Chr12.172.1 Chr12 5341091 5494549 PREDICTED: Potassium voltage-gated channel subfamily H member 7 GO:0005216;GO:0005249;GO:0006811;GO:0006813;GO:0016020;GO:0016020;GO:0055085 K04905
gene-evm.TU.Chr12.1720 rna-evm.model.Chr12.1720 Chr12 54665057 54681156 PREDICTED: Thrombospondin-2 nan K04596
gene-evm.TU.Chr12.1721 rna-evm.model.Chr12.1721 Chr12 54720405 54722528 uncharacterized protein nan K19004
gene-evm.TU.Chr12.1723 rna-evm.model.Chr12.1723 Chr12 54775529 54787636 uncharacterized protein nan K01344
gene-evm.TU.Chr12.1725 rna-evm.model.Chr12.1725 Chr12 54848425 54852420 uncharacterized protein nan K00791
gene-evm.TU.Chr12.1727 rna-evm.model.Chr12.1727 Chr12 54927563 54933438 uncharacterized protein nan K09132
gene-evm.TU.Chr12.1728 rna-evm.model.Chr12.1728 Chr12 54934879 54936612 PREDICTED: protein kinase D [EC:2.7.11.13] nan K19120
gene-evm.TU.Chr12.1729 rna-evm.model.Chr12.1729 Chr12 54978727 54985595 uncharacterized protein nan K00791
gene-evm.TU.Chr12.173 rna-evm.model.Chr12.173 Chr12 5503779 5507635 PREDICTED: Sepiapterin reductase nan K00072
gene-evm.TU.Chr12.1730 rna-evm.model.Chr12.1730 Chr12 55009029 55016260 PREDICTED: 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] nan K24190

For more detailed data, you can explore the Download section to access the full dataset.