CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1468 rna-evm.model.Chr12.1468 Chr12 46875183 46896273 uncharacterized protein nan K24775
gene-evm.TU.Chr12.1469 rna-evm.model.Chr12.1469 Chr12 46902008 46925892 PREDICTED: Cell division cycle protein 27 homolog GO:0005515 K03350
gene-evm.TU.Chr12.147 rna-evm.model.Chr12.147 Chr12 4767323 4769016 uncharacterized protein nan K18716
gene-evm.TU.Chr12.1472 rna-evm.model.Chr12.1472 Chr12 46980737 46992707 uncharacterized protein nan K04087
gene-evm.TU.Chr12.1473 rna-evm.model.Chr12.1473 Chr12 47017495 47020537 PREDICTED: Leucine-rich repeat-containing protein 4 nan K06839
gene-evm.TU.Chr12.1474 rna-evm.model.Chr12.1474 Chr12 47032760 47041645 PREDICTED: Neuronal acetylcholine receptor subunit alpha-10 GO:0004888;GO:0005216;GO:0005230;GO:0006811;GO:0016020;GO:0034220 K04814
gene-evm.TU.Chr12.1475 rna-evm.model.Chr12.1475 Chr12 47043652 47047786 PREDICTED: Acetylcholine receptor subunit alpha-L1 GO:0004888;GO:0005216;GO:0005230;GO:0006811;GO:0016020;GO:0034220 K04814
gene-evm.TU.Chr12.1476 rna-evm.model.Chr12.1476 Chr12 47054524 47056771 PREDICTED: Acetylcholine receptor subunit alpha-L1 GO:0004888;GO:0005216;GO:0005230;GO:0006811;GO:0016020;GO:0034220 K04808
gene-evm.TU.Chr12.1477 rna-evm.model.Chr12.1477 Chr12 47061031 47064022 PREDICTED: Neuronal acetylcholine receptor subunit beta-3 GO:0004888;GO:0005216;GO:0005230;GO:0006811;GO:0016020;GO:0034220 K04814
gene-evm.TU.Chr12.1478 rna-evm.model.Chr12.1478 Chr12 47068935 47073481 PREDICTED: Cell surface hyaluronidase nan K22144

For more detailed data, you can explore the Download section to access the full dataset.