CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1379 rna-evm.model.Chr12.1379 Chr12 43942085 43942575 uncharacterized protein nan nan
gene-evm.TU.Chr12.138 rna-evm.model.Chr12.138 Chr12 4662104 4678993 PREDICTED: von Willebrand factor D and EGF domain-containing protein nan K24431
gene-evm.TU.Chr12.1380 rna-evm.model.Chr12.1380 Chr12 44063956 44064888 uncharacterized protein nan nan
gene-evm.TU.Chr12.1381 rna-evm.model.Chr12.1381 Chr12 44086113 44086493 PREDICTED: E1A/CREB-binding protein [EC:2.3.1.48] nan nan
gene-evm.TU.Chr12.1382 rna-evm.model.Chr12.1382 Chr12 44086791 44087261 PREDICTED: E1A/CREB-binding protein [EC:2.3.1.48] nan nan
gene-evm.TU.Chr12.1383 rna-evm.model.Chr12.1383 Chr12 44087330 44087767 PREDICTED: aubergine nan nan
gene-evm.TU.Chr12.1387 rna-evm.model.Chr12.1387 Chr12 44118616 44121177 PREDICTED: collagen, type VI, alpha nan K05768
gene-evm.TU.Chr12.139 rna-evm.model.Chr12.139 Chr12 4680076 4683806 PREDICTED: Pancreatic secretory granule membrane major glycoprotein GP2 nan K19899
gene-evm.TU.Chr12.1390 rna-evm.model.Chr12.1390 Chr12 44253397 44258605 uncharacterized protein nan K06846
gene-evm.TU.Chr12.1391 rna-evm.model.Chr12.1391 Chr12 44259681 44261258 uncharacterized protein nan K06872

For more detailed data, you can explore the Download section to access the full dataset.