CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.1366 rna-evm.model.Chr12.1366 Chr12 43401189 43415122 PREDICTED: Gamma-aminobutyric acid type B receptor subunit 1 GO:0004930;GO:0004965;GO:0007186;GO:0016020 K04615
gene-evm.TU.Chr12.1367 rna-evm.model.Chr12.1367 Chr12 43436900 43477191 PREDICTED: Gamma-aminobutyric acid type B receptor subunit 1 GO:0004930;GO:0004965;GO:0007186;GO:0016020 K04615
gene-evm.TU.Chr12.1369 rna-evm.model.Chr12.1369 Chr12 43561853 43566436 PREDICTED: Complement receptor type 2 nan K04012
gene-evm.TU.Chr12.1370 rna-evm.model.Chr12.1370 Chr12 43572743 43574597 PREDICTED: Acyl-coenzyme A thioesterase 13 GO:0047617 K17362
gene-evm.TU.Chr12.1371 rna-evm.model.Chr12.1371 Chr12 43582627 43586717 PREDICTED: Multifunctional protein ADE2 GO:0006189 K01587
gene-evm.TU.Chr12.1372 rna-evm.model.Chr12.1372 Chr12 43593245 43594354 PREDICTED: cysteinyl leukotriene receptor 1 GO:0004930;GO:0007186;GO:0016020 K08428
gene-evm.TU.Chr12.1373 rna-evm.model.Chr12.1373 Chr12 43605915 43608124 uncharacterized protein nan K16817
gene-evm.TU.Chr12.1374 rna-evm.model.Chr12.1374 Chr12 43612388 43636608 PREDICTED: Short-chain dehydrogenase/reductase family 9C member 7 nan K13369
gene-evm.TU.Chr12.1375 rna-evm.model.Chr12.1375 Chr12 43677537 43757952 PREDICTED: Rap guanine nucleotide exchange factor 4 GO:0005085;GO:0007264;GO:0035556 K04351
gene-evm.TU.Chr12.1376 rna-evm.model.Chr12.1376 Chr12 43777155 43781720 PREDICTED: Dephospho-CoA kinase domain-containing protein GO:0004140;GO:0005524;GO:0015937 K00859

For more detailed data, you can explore the Download section to access the full dataset.