CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr12.128 rna-evm.model.Chr12.128 Chr12 4319036 4320281 PREDICTED: 3'-5' ssDNA/RNA exonuclease TatD GO:0016788 K03424
gene-evm.TU.Chr12.1281 rna-evm.model.Chr12.1281 Chr12 41196589 41196948 uncharacterized protein nan nan
gene-evm.TU.Chr12.1283 rna-evm.model.Chr12.1283 Chr12 41197650 41198319 uncharacterized protein nan K08275
gene-evm.TU.Chr12.1288 rna-evm.model.Chr12.1288 Chr12 41261960 41281162 PREDICTED: Ankyrin repeat domain-containing protein 12 GO:0005515 K09257
gene-evm.TU.Chr12.1289 rna-evm.model.Chr12.1289 Chr12 41281215 41281472 uncharacterized protein nan nan
gene-evm.TU.Chr12.1290 rna-evm.model.Chr12.1290 Chr12 41296049 41315092 uncharacterized protein nan nan
gene-evm.TU.Chr12.1293 rna-evm.model.Chr12.1293 Chr12 41387801 41389621 uncharacterized protein nan K06299
gene-evm.TU.Chr12.1294 rna-evm.model.Chr12.1294 Chr12 41391556 41394748 uncharacterized protein nan nan
gene-evm.TU.Chr12.1295 rna-evm.model.Chr12.1295 Chr12 41395577 41396476 PREDICTED: Telomerase reverse transcriptase nan K11126
gene-evm.TU.Chr12.1296 rna-evm.model.Chr12.1296 Chr12 41396477 41397169 PREDICTED: tripartite motif-containing protein 2/3 nan K26041

For more detailed data, you can explore the Download section to access the full dataset.