CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.959 rna-evm.model.Chr11.959 Chr11 37435498 37448073 PREDICTED: F-box/WD repeat-containing protein 2 GO:0005515 K10261
gene-evm.TU.Chr11.960 rna-evm.model.Chr11.960 Chr11 37453806 37469988 PREDICTED: Stabilizer of axonemal microtubules 1 GO:0008017 K25472
gene-evm.TU.Chr11.961 rna-evm.model.Chr11.961 Chr11 37473684 37480748 PREDICTED: Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial nan K05396
gene-evm.TU.Chr11.962 rna-evm.model.Chr11.962 Chr11 37491066 37639981 PREDICTED: Multiple C2 and transmembrane domain-containing protein 1 nan K17632
gene-evm.TU.Chr11.964 rna-evm.model.Chr11.964 Chr11 37752156 37752515 PREDICTED: solute carrier family 23 (nucleobase transporter), member 1/2 nan nan
gene-evm.TU.Chr11.967 rna-evm.model.Chr11.967 Chr11 37826958 37843705 uncharacterized protein nan K24613
gene-evm.TU.Chr11.968 rna-evm.model.Chr11.968 Chr11 37849617 37858387 PREDICTED: Tripartite motif-containing protein 2 nan K11997
gene-evm.TU.Chr11.970 rna-evm.model.Chr11.970 Chr11 37986714 37987784 PREDICTED: solute carrier family 15, member 5 nan nan
gene-evm.TU.Chr11.973 rna-evm.model.Chr11.973 Chr11 38167595 38170069 uncharacterized protein GO:0005515 K10450
gene-evm.TU.Chr11.977 rna-evm.model.Chr11.977 Chr11 38192694 38196066 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.