CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.899 rna-evm.model.Chr11.899 Chr11 34819713 34822360 PREDICTED: Nuclear receptor 2C2-associated protein nan K16648
gene-evm.TU.Chr11.900 rna-evm.model.Chr11.900 Chr11 34826732 34852962 PREDICTED: SURP and G-patch domain-containing protein 1 GO:0003676;GO:0003723;GO:0006396 K13096
gene-evm.TU.Chr11.901 rna-evm.model.Chr11.901 Chr11 34866504 34869257 uncharacterized protein nan K14496
gene-evm.TU.Chr11.902 rna-evm.model.Chr11.902 Chr11 34880730 34885112 uncharacterized protein nan K01992
gene-evm.TU.Chr11.903 rna-evm.model.Chr11.903 Chr11 34891033 34899034 uncharacterized protein GO:0005515 K01992
gene-evm.TU.Chr11.904 rna-evm.model.Chr11.904 Chr11 34903118 34934018 PREDICTED: Zinc finger MYND domain-containing protein 15 nan K24081
gene-evm.TU.Chr11.905 rna-evm.model.Chr11.905 Chr11 34954452 34982714 uncharacterized protein nan K25493
gene-evm.TU.Chr11.906 rna-evm.model.Chr11.906 Chr11 34998057 34998536 uncharacterized protein nan nan
gene-evm.TU.Chr11.908 rna-evm.model.Chr11.908 Chr11 35049787 35052641 uncharacterized protein nan nan
gene-evm.TU.Chr11.910 rna-evm.model.Chr11.910 Chr11 35076595 35094734 PREDICTED: Transcriptional repressor p66-alpha GO:0000122;GO:0006355;GO:0008270;GO:0043565 K23194

For more detailed data, you can explore the Download section to access the full dataset.