CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.922 rna-evm.model.Chr11.922 Chr11 35595707 35596279 PREDICTED: protein kinase D [EC:2.7.11.13] nan nan
gene-evm.TU.Chr11.924 rna-evm.model.Chr11.924 Chr11 35899244 35899563 uncharacterized protein GO:0003677;GO:0006355 K07499
gene-evm.TU.Chr11.925 rna-evm.model.Chr11.925 Chr11 35955076 35955378 PREDICTED: tyrosine-protein kinase Tec [EC:2.7.10.2] nan K05398
gene-evm.TU.Chr11.926 rna-evm.model.Chr11.926 Chr11 36015514 36081213 PREDICTED: Zwei Ig domain protein zig-8 nan K06774
gene-evm.TU.Chr11.927 rna-evm.model.Chr11.927 Chr11 36152296 36152955 PREDICTED: Zinc finger protein 41 GO:0003676 K22534
gene-evm.TU.Chr11.928 rna-evm.model.Chr11.928 Chr11 36154046 36154836 uncharacterized protein nan nan
gene-evm.TU.Chr11.929 rna-evm.model.Chr11.929 Chr11 36154957 36158673 uncharacterized protein nan K23209
gene-evm.TU.Chr11.93 rna-evm.model.Chr11.93 Chr11 4326250 4369374 PREDICTED: Homer protein homolog 2 nan K15010
gene-evm.TU.Chr11.936 rna-evm.model.Chr11.936 Chr11 36590889 36604005 PREDICTED: Universal stress protein Slr1101 nan K14055
gene-evm.TU.Chr11.938 rna-evm.model.Chr11.938 Chr11 36764058 36769069 PREDICTED: G2/mitotic-specific cyclin-B GO:0005634 K21770

For more detailed data, you can explore the Download section to access the full dataset.