CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.690 rna-evm.model.Chr11.690 Chr11 26919810 26997740 PREDICTED: M-phase phosphoprotein 8 nan nan
gene-evm.TU.Chr11.691 rna-evm.model.Chr11.691 Chr11 26988294 27010088 uncharacterized protein nan nan
gene-evm.TU.Chr11.692 rna-evm.model.Chr11.692 Chr11 27080935 27081984 uncharacterized protein nan K12580
gene-evm.TU.Chr11.693 rna-evm.model.Chr11.693 Chr11 27082531 27083469 PREDICTED: Protein P nan K21037
gene-evm.TU.Chr11.695 rna-evm.model.Chr11.695 Chr11 27112285 27157839 PREDICTED: Galactose-1-phosphate uridylyltransferase GO:0006012;GO:0008108;GO:0008270;GO:0033499 K00965
gene-evm.TU.Chr11.696 rna-evm.model.Chr11.696 Chr11 27163995 27312807 PREDICTED: Centlein nan K16467
gene-evm.TU.Chr11.697 rna-evm.model.Chr11.697 Chr11 27329764 27407048 PREDICTED: Zinc finger protein basonuclin-1 GO:0003676 K24146
gene-evm.TU.Chr11.698 rna-evm.model.Chr11.698 Chr11 27415232 27426751 uncharacterized protein nan K06553
gene-evm.TU.Chr11.699 rna-evm.model.Chr11.699 Chr11 27444433 27460815 PREDICTED: Hemicentin-2 nan K06491
gene-evm.TU.Chr11.7 rna-evm.model.Chr11.7 Chr11 265057 379201 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.