CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.681 rna-evm.model.Chr11.681 Chr11 26247844 26248158 PREDICTED: Transposable element Tc1 transposase nan K07494
gene-evm.TU.Chr11.682 rna-evm.model.Chr11.682.1 Chr11 26514218 26533222 uncharacterized protein nan K05340
gene-evm.TU.Chr11.683 rna-evm.model.Chr11.683 Chr11 26554802 26555503 uncharacterized protein nan nan
gene-evm.TU.Chr11.684 rna-evm.model.Chr11.684 Chr11 26581681 26627854 PREDICTED: Oligoribonuclease, mitochondrial nan K13288
gene-evm.TU.Chr11.685 rna-evm.model.Chr11.685 Chr11 26664381 26729003 PREDICTED: Lachesin nan K06774
gene-evm.TU.Chr11.686 rna-evm.model.Chr11.686 Chr11 26729423 26730417 PREDICTED: Transposable element Tcb1 transposase nan K07494
gene-evm.TU.Chr11.687 rna-evm.model.Chr11.687 Chr11 26745961 26746674 PREDICTED: protein kinase D [EC:2.7.11.13] nan K16759
gene-evm.TU.Chr11.688 rna-evm.model.Chr11.688 Chr11 26838918 26890912 uncharacterized protein nan K10983
gene-evm.TU.Chr11.689 rna-evm.model.Chr11.689 Chr11 26898509 26899585 PREDICTED: protein kinase D [EC:2.7.11.13] nan K07164
gene-evm.TU.Chr11.69 rna-evm.model.Chr11.69 Chr11 3849012 3853425 PREDICTED: 60 kDa SS-A/Ro ribonucleoprotein GO:0003723 K11089

For more detailed data, you can explore the Download section to access the full dataset.