CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.324 rna-evm.model.Chr11.324 Chr11 13257317 13322043 PREDICTED: Transmembrane cell adhesion receptor mua-3 nan K24333
gene-evm.TU.Chr11.325 rna-evm.model.Chr11.325 Chr11 13322257 13339110 PREDICTED: fibrillin 2/3 nan K08654
gene-evm.TU.Chr11.327 rna-evm.model.Chr11.327 Chr11 13356132 13380058 PREDICTED: Matrilin-2 nan K06238
gene-evm.TU.Chr11.328 rna-evm.model.Chr11.328 Chr11 13381466 13386417 PREDICTED: DET1 homolog nan K10571
gene-evm.TU.Chr11.329 rna-evm.model.Chr11.329 Chr11 13397478 13434310 PREDICTED: Tropomyosin nan K10373
gene-evm.TU.Chr11.33 rna-evm.model.Chr11.33 Chr11 2162298 2169655 PREDICTED: Probable RNA-directed DNA polymerase from transposon BS nan K26653
gene-evm.TU.Chr11.331 rna-evm.model.Chr11.331 Chr11 13544894 13546005 uncharacterized protein nan K21504
gene-evm.TU.Chr11.332 rna-evm.model.Chr11.332 Chr11 13602633 13605958 uncharacterized protein nan nan
gene-evm.TU.Chr11.333 rna-evm.model.Chr11.333 Chr11 13627415 13632154 PREDICTED: importin-4 nan nan
gene-evm.TU.Chr11.334 rna-evm.model.Chr11.334 Chr11 13645529 13647735 PREDICTED: THAP domain-containing protein 11 GO:0003676 K23222

For more detailed data, you can explore the Download section to access the full dataset.