CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.1713 rna-evm.model.Chr11.1713 Chr11 68404296 68446504 PREDICTED: Myotubularin-related protein 10-B nan K18085
gene-evm.TU.Chr11.1714 rna-evm.model.Chr11.1714 Chr11 68453180 68459714 uncharacterized protein nan K03073
gene-evm.TU.Chr11.1715 rna-evm.model.Chr11.1715 Chr11 68468252 68591563 PREDICTED: Myosin-10 GO:0005515;GO:0005576;GO:0006030;GO:0008061 K08654
gene-evm.TU.Chr11.1716 rna-evm.model.Chr11.1716.1 Chr11 68614169 68645019 PREDICTED: Tyrosine-protein kinase CSK GO:0004672;GO:0004713;GO:0005515;GO:0005524;GO:0006468 K05728
gene-evm.TU.Chr11.1717 rna-evm.model.Chr11.1717 Chr11 68656551 68657227 uncharacterized protein nan nan
gene-evm.TU.Chr11.1718 rna-evm.model.Chr11.1718 Chr11 68661432 68676366 PREDICTED: Nicalin GO:0009966;GO:0016020 K26499
gene-evm.TU.Chr11.172 rna-evm.model.Chr11.172 Chr11 6999481 7016748 uncharacterized protein nan K01058
gene-evm.TU.Chr11.1720 rna-evm.model.Chr11.1720 Chr11 68690243 68694800 PREDICTED: Toll-like receptor 4 GO:0005515;GO:0007165 K10160
gene-evm.TU.Chr11.1721 rna-evm.model.Chr11.1721 Chr11 68698063 68703508 PREDICTED: Adenylate kinase isoenzyme 6 nan K18532
gene-evm.TU.Chr11.1722_evm.TU.Chr11.1723 rna-evm.model.Chr11.1722_evm.model.Chr11.1723 Chr11 68714095 68850870 PREDICTED: A-kinase anchor protein 13 GO:0005085;GO:0035023;GO:0035556 K21066

For more detailed data, you can explore the Download section to access the full dataset.