CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr11.1508 rna-evm.model.Chr11.1508 Chr11 60661949 60662332 PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase [EC:2.3.2.26] GO:0004842 K22371
gene-evm.TU.Chr11.1511 rna-evm.model.Chr11.1511 Chr11 60812169 60812408 PREDICTED: Tigger transposable element-derived protein 6 GO:0003676 K26240
gene-evm.TU.Chr11.1513 rna-evm.model.Chr11.1513 Chr11 60838860 60845062 uncharacterized protein nan nan
gene-evm.TU.Chr11.1515 rna-evm.model.Chr11.1515 Chr11 60962767 60963411 uncharacterized protein nan K10804
gene-evm.TU.Chr11.1516 rna-evm.model.Chr11.1516 Chr11 60964425 60965573 uncharacterized protein nan K22755
gene-evm.TU.Chr11.1517 rna-evm.model.Chr11.1517 Chr11 60966353 60966935 uncharacterized protein nan nan
gene-evm.TU.Chr11.1518 rna-evm.model.Chr11.1518 Chr11 60967116 60967397 PREDICTED: myotubularin-related protein 10/11/12 nan nan
gene-evm.TU.Chr11.1519 rna-evm.model.Chr11.1519 Chr11 60967726 60968079 uncharacterized protein nan nan
gene-evm.TU.Chr11.152 rna-evm.model.Chr11.152 Chr11 6422847 6486278 PREDICTED: golgin subfamily B member 1 nan K09291
gene-evm.TU.Chr11.1520 rna-evm.model.Chr11.1520 Chr11 61020545 61035860 PREDICTED: 40S ribosomal protein S15 GO:0003735;GO:0005840;GO:0006412 K02958

For more detailed data, you can explore the Download section to access the full dataset.