CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.992 rna-evm.model.Chr10.992 Chr10 32153168 32161993 uncharacterized protein nan K06477
gene-evm.TU.Chr10.994 rna-evm.model.Chr10.994 Chr10 32257231 32262564 PREDICTED: Titin GO:0005515 K05695
gene-evm.TU.Chr10.996 rna-evm.model.Chr10.996 Chr10 32407929 32410769 PREDICTED: Protein sidekick homolog GO:0005515 K05695
gene-evm.TU.Chr10.999 rna-evm.model.Chr10.999 Chr10 32521266 32521928 PREDICTED: Protein GVQW3 nan K07499
gene-evm.TU.Chr11.1 rna-evm.model.Chr11.1 Chr11 14313 15049 uncharacterized protein nan nan
gene-evm.TU.Chr11.1000 rna-evm.model.Chr11.1000 Chr11 38610559 38613172 PREDICTED: deleted in malignant brain tumors 1 protein nan K26936
gene-evm.TU.Chr11.1002 rna-evm.model.Chr11.1002 Chr11 38646731 38652314 uncharacterized protein nan K17589
gene-evm.TU.Chr11.1003 rna-evm.model.Chr11.1003 Chr11 38652454 38697106 PREDICTED: Complement C1q tumor necrosis factor-related protein 2 nan K23284
gene-evm.TU.Chr11.1004 rna-evm.model.Chr11.1004 Chr11 38711615 38715255 uncharacterized protein nan nan
gene-evm.TU.Chr11.1006 rna-evm.model.Chr11.1006.1 Chr11 38781156 38787411 PREDICTED: Follistatin GO:0005515 K04661

For more detailed data, you can explore the Download section to access the full dataset.