CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.799 rna-evm.model.Chr10.799 Chr10 25491699 25513334 uncharacterized protein nan nan
gene-evm.TU.Chr10.80 rna-evm.model.Chr10.80 Chr10 2585842 2614671 PREDICTED: Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 nan K13646
gene-evm.TU.Chr10.800 rna-evm.model.Chr10.800 Chr10 25585897 25600421 PREDICTED: Solute carrier family 49 member A3 GO:0016020;GO:0055085 K12306
gene-evm.TU.Chr10.801 rna-evm.model.Chr10.801 Chr10 25605760 25610949 uncharacterized protein nan K09546
gene-evm.TU.Chr10.803 rna-evm.model.Chr10.803 Chr10 25644063 25646091 uncharacterized protein nan K08672
gene-evm.TU.Chr10.804 rna-evm.model.Chr10.804 Chr10 25658541 25662398 PREDICTED: Galaxin nan K19636
gene-evm.TU.Chr10.805 rna-evm.model.Chr10.805 Chr10 25671199 25678502 PREDICTED: ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] nan K14523
gene-evm.TU.Chr10.806 rna-evm.model.Chr10.806 Chr10 25680671 25745484 PREDICTED: Acylamino-acid-releasing enzyme GO:0006508;GO:0008236 K01303
gene-evm.TU.Chr10.807 rna-evm.model.Chr10.807 Chr10 25751837 25757645 PREDICTED: Galaxin nan K19636
gene-evm.TU.Chr10.808 rna-evm.model.Chr10.808 Chr10 25769215 25771807 PREDICTED: Laccase-2 GO:0005507;GO:0016491;GO:0055114 K00423

For more detailed data, you can explore the Download section to access the full dataset.