CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.738 rna-evm.model.Chr10.738 Chr10 23674681 23684773 uncharacterized protein nan nan
gene-evm.TU.Chr10.739 rna-evm.model.Chr10.739 Chr10 23703372 23703628 PREDICTED: Transposable element Tc1 transposase nan K07499
gene-evm.TU.Chr10.740 rna-evm.model.Chr10.740 Chr10 23789748 23790212 PREDICTED: Aggrecan core protein nan K10064
gene-evm.TU.Chr10.741 rna-evm.model.Chr10.741 Chr10 23791368 23791601 uncharacterized protein nan nan
gene-evm.TU.Chr10.742 rna-evm.model.Chr10.742 Chr10 23849564 23851348 PREDICTED: Pulmonary surfactant-associated protein D nan K10059
gene-evm.TU.Chr10.746 rna-evm.model.Chr10.746 Chr10 24126967 24127644 PREDICTED: Transposable element Tcb1 transposase nan K07494
gene-evm.TU.Chr10.747 rna-evm.model.Chr10.747 Chr10 24148843 24153001 uncharacterized protein nan nan
gene-evm.TU.Chr10.749 rna-evm.model.Chr10.749 Chr10 24324647 24329843 PREDICTED: Neurocan core protein nan K22244
gene-evm.TU.Chr10.750 rna-evm.model.Chr10.750 Chr10 24331238 24337220 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr10.751 rna-evm.model.Chr10.751 Chr10 24339137 24348320 PREDICTED: Heat shock 70 kDa protein 12A nan K04043

For more detailed data, you can explore the Download section to access the full dataset.