CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.753 rna-evm.model.Chr10.753 Chr10 24425545 24435500 PREDICTED: Zinc finger protein 536 GO:0003676 K19871
gene-evm.TU.Chr10.755 rna-evm.model.Chr10.755 Chr10 24447018 24448140 PREDICTED: complement component 4 nan K22228
gene-evm.TU.Chr10.756 rna-evm.model.Chr10.756 Chr10 24459951 24460868 PREDICTED: complement component 4 nan nan
gene-evm.TU.Chr10.759 rna-evm.model.Chr10.759 Chr10 24572391 24576182 PREDICTED: 5-hydroxytryptamine receptor GO:0004930;GO:0007186;GO:0016020 K04153
gene-evm.TU.Chr10.76 rna-evm.model.Chr10.76 Chr10 2331983 2332303 PREDICTED: AF4/FMR2 family member 4 nan K04223
gene-evm.TU.Chr10.760 rna-evm.model.Chr10.760 Chr10 24601937 24603902 PREDICTED: complement component 4 nan K09856
gene-evm.TU.Chr10.761 rna-evm.model.Chr10.761 Chr10 24628332 24628971 PREDICTED: complement component 4 nan nan
gene-evm.TU.Chr10.762 rna-evm.model.Chr10.762 Chr10 24628972 24629163 PREDICTED: complement component 4 nan nan
gene-evm.TU.Chr10.763 rna-evm.model.Chr10.763 Chr10 24641043 24641999 PREDICTED: complement component 4 nan nan
gene-evm.TU.Chr10.764 rna-evm.model.Chr10.764 Chr10 24652256 24659533 PREDICTED: complement component 4 nan nan

For more detailed data, you can explore the Download section to access the full dataset.