CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.720 rna-evm.model.Chr10.720 Chr10 22856373 22859680 PREDICTED: Uncharacterized protein C3orf14 nan K18597
gene-evm.TU.Chr10.721 rna-evm.model.Chr10.721 Chr10 22861613 22862145 uncharacterized protein nan K16242
gene-evm.TU.Chr10.722 rna-evm.model.Chr10.722 Chr10 22864557 22870928 PREDICTED: Tripartite motif-containing protein 2 nan K12026
gene-evm.TU.Chr10.725 rna-evm.model.Chr10.725 Chr10 23066470 23067789 uncharacterized protein nan nan
gene-evm.TU.Chr10.726 rna-evm.model.Chr10.726 Chr10 23132686 23146106 uncharacterized protein nan nan
gene-evm.TU.Chr10.730 rna-evm.model.Chr10.730 Chr10 23442941 23476760 PREDICTED: 39S ribosomal protein L20, mitochondrial GO:0003735;GO:0005840;GO:0006412;GO:0019843 K02887
gene-evm.TU.Chr10.731 rna-evm.model.Chr10.731 Chr10 23476812 23487024 PREDICTED: Collagen alpha-1(XII) chain nan K06238
gene-evm.TU.Chr10.732 rna-evm.model.Chr10.732 Chr10 23495260 23515411 PREDICTED: Nose resistant to fluoxetine protein 6 GO:0016747 K16568
gene-evm.TU.Chr10.735 rna-evm.model.Chr10.735 Chr10 23576336 23583349 uncharacterized protein nan nan
gene-evm.TU.Chr10.737 rna-evm.model.Chr10.737 Chr10 23620470 23658939 PREDICTED: Probable cation-transporting ATPase 13A3 GO:0006812;GO:0016020;GO:0016887 K14951

For more detailed data, you can explore the Download section to access the full dataset.