CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.1421 rna-evm.model.Chr1.1421 Chr1 45548149 45550063 PREDICTED: THAP domain-containing protein 2 GO:0003676 K23204
gene-evm.TU.Chr1.1422 rna-evm.model.Chr1.1422 Chr1 45577653 45603002 PREDICTED: Proline-rich transmembrane protein 2 GO:0016020 K23897
gene-evm.TU.Chr1.1423 rna-evm.model.Chr1.1423 Chr1 45616111 45619077 PREDICTED: Jerky protein homolog-like GO:0003676;GO:0003677 K22594
gene-evm.TU.Chr1.1424 rna-evm.model.Chr1.1424 Chr1 45633049 45638654 PREDICTED: Zinc finger MYM-type protein 1 GO:0046983 K24674
gene-evm.TU.Chr1.1425 rna-evm.model.Chr1.1425 Chr1 45667901 45668071 uncharacterized protein GO:0016020 K23896
gene-evm.TU.Chr1.1427 rna-evm.model.Chr1.1427 Chr1 45768900 45837774 PREDICTED: Proline-rich transmembrane protein 2 GO:0016020 K23896
gene-evm.TU.Chr1.1428 rna-evm.model.Chr1.1428 Chr1 45854039 45868022 PREDICTED: Proline-rich transmembrane protein 2 GO:0016020 K23896
gene-evm.TU.Chr1.1429 rna-evm.model.Chr1.1429 Chr1 45869851 45894699 PREDICTED: Proline-rich transmembrane protein 1 GO:0016020 K23896
gene-evm.TU.Chr1.143 rna-evm.model.Chr1.143 Chr1 4870541 4871528 uncharacterized protein nan nan
gene-evm.TU.Chr1.1430 rna-evm.model.Chr1.1430 Chr1 45959945 45961932 uncharacterized protein nan K09976

For more detailed data, you can explore the Download section to access the full dataset.