CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.1348 rna-evm.model.Chr1.1348 Chr1 42645962 42646444 PREDICTED: Vertnin nan nan
gene-evm.TU.Chr1.135 rna-evm.model.Chr1.135 Chr1 4447130 4447336 uncharacterized protein nan nan
gene-evm.TU.Chr1.1354 rna-evm.model.Chr1.1354 Chr1 42791719 42810707 uncharacterized protein nan nan
gene-evm.TU.Chr1.1355 rna-evm.model.Chr1.1355 Chr1 42865261 42869641 uncharacterized protein nan nan
gene-evm.TU.Chr1.1356 rna-evm.model.Chr1.1356 Chr1 42870240 42870949 uncharacterized protein nan K04243
gene-evm.TU.Chr1.1358 rna-evm.model.Chr1.1358 Chr1 42871787 42872813 PREDICTED: NLR family CARD domain-containing protein 3 nan nan
gene-evm.TU.Chr1.1359 rna-evm.model.Chr1.1359 Chr1 42873261 42873731 PREDICTED: Vertnin nan nan
gene-evm.TU.Chr1.1361 rna-evm.model.Chr1.1361 Chr1 42948230 42995715 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr1.1363 rna-evm.model.Chr1.1363 Chr1 43008494 43012345 uncharacterized protein nan nan
gene-evm.TU.Chr1.1364 rna-evm.model.Chr1.1364 Chr1 43022088 43024349 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.