CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.1393 rna-evm.model.Chr1.1393 Chr1 44568846 44571757 PREDICTED: Large tegument protein deneddylase nan K21075
gene-evm.TU.Chr1.1394 rna-evm.model.Chr1.1394 Chr1 44651184 44665188 uncharacterized protein nan nan
gene-evm.TU.Chr1.1395 rna-evm.model.Chr1.1395 Chr1 44780705 44781280 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K21548
gene-evm.TU.Chr1.1396 rna-evm.model.Chr1.1396 Chr1 44911489 44925250 PREDICTED: DNA-binding protein SMUBP-2 GO:0003676;GO:0008270 K19036
gene-evm.TU.Chr1.1397 rna-evm.model.Chr1.1397 Chr1 44951829 44954609 PREDICTED: putative kinase nan K17583
gene-evm.TU.Chr1.1399 rna-evm.model.Chr1.1399 Chr1 44990201 45008370 PREDICTED: Notch 2 nan K20413
gene-evm.TU.Chr1.14 rna-evm.model.Chr1.14 Chr1 572598 575428 uncharacterized protein nan nan
gene-evm.TU.Chr1.1402 rna-evm.model.Chr1.1402 Chr1 45043327 45048991 uncharacterized protein nan K13523
gene-evm.TU.Chr1.1403 rna-evm.model.Chr1.1403 Chr1 45051375 45057062 uncharacterized protein nan K02445
gene-evm.TU.Chr1.1404 rna-evm.model.Chr1.1404 Chr1 45062011 45069845 PREDICTED: early B-cell factor nan K10135

For more detailed data, you can explore the Download section to access the full dataset.