CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.620 rna-evm.model.Chr10.620 Chr10 19151167 19197919 PREDICTED: Tumor protein 63 GO:0003677;GO:0003700;GO:0005515;GO:0005634;GO:0006355;GO:0006915;GO:0000976;GO:0051262 K10149
gene-evm.TU.Chr10.622 rna-evm.model.Chr10.622 Chr10 19223498 19237118 PREDICTED: Arylsulfatase I GO:0008484 K01135
gene-evm.TU.Chr10.623 rna-evm.model.Chr10.623 Chr10 19238735 19251774 PREDICTED: Arylsulfatase I GO:0008484 K01135
gene-evm.TU.Chr10.624 rna-evm.model.Chr10.624 Chr10 19255070 19255351 uncharacterized protein nan nan
gene-evm.TU.Chr10.626 rna-evm.model.Chr10.626 Chr10 19281218 19303133 PREDICTED: Interleukin-6 receptor subunit beta GO:0005515 K05060
gene-evm.TU.Chr10.628 rna-evm.model.Chr10.628 Chr10 19326437 19331071 uncharacterized protein nan nan
gene-evm.TU.Chr10.63 rna-evm.model.Chr10.63 Chr10 2105239 2129956 PREDICTED: solute carrier family 23 (nucleobase transporter), member 1/2 GO:0003677 K12047
gene-evm.TU.Chr10.630 rna-evm.model.Chr10.630 Chr10 19360136 19376694 PREDICTED: cytokine receptor domeless GO:0005515 K19599
gene-evm.TU.Chr10.637 rna-evm.model.Chr10.637 Chr10 19439345 19439767 PREDICTED: tripartite motif-containing protein 2/3 nan K26041
gene-evm.TU.Chr10.64 rna-evm.model.Chr10.64 Chr10 2185542 2185886 PREDICTED: Mariner Mos1 transposase nan nan

For more detailed data, you can explore the Download section to access the full dataset.