CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.2281 rna-evm.model.Chr10.2281 Chr10 69362057 69362783 PREDICTED: BTB/POZ domain-containing protein KCTD1/15 nan K05457
gene-evm.TU.Chr10.2282 rna-evm.model.Chr10.2282 Chr10 69389514 69400450 PREDICTED: Endoglucanase E-4 GO:0004553;GO:0005975 K12855
gene-evm.TU.Chr10.2283 rna-evm.model.Chr10.2283 Chr10 69402785 69410765 PREDICTED: V-type proton ATPase subunit S1 GO:1902600;GO:0033180;GO:0046933;GO:0046961 K03662
gene-evm.TU.Chr10.2288 rna-evm.model.Chr10.2288 Chr10 69445561 69449714 PREDICTED: Dynamin-like 120 kDa protein, mitochondrial GO:0003924;GO:0005739;GO:0006915;GO:0007005 K17079
gene-evm.TU.Chr10.2289 rna-evm.model.Chr10.2289 Chr10 69452957 69454168 PREDICTED: inner nuclear membrane protein Man1 GO:0008270 K21233
gene-evm.TU.Chr10.2293 rna-evm.model.Chr10.2293 Chr10 69620154 69623871 uncharacterized protein nan K03108
gene-evm.TU.Chr10.2294 rna-evm.model.Chr10.2294 Chr10 69623928 69624563 uncharacterized protein nan K18616
gene-evm.TU.Chr10.2295 rna-evm.model.Chr10.2295 Chr10 69624825 69625364 uncharacterized protein nan K17446
gene-evm.TU.Chr10.2296 rna-evm.model.Chr10.2296 Chr10 69654775 69655365 PREDICTED: CTP synthase [EC:6.3.4.2] nan K23449
gene-evm.TU.Chr10.2297 rna-evm.model.Chr10.2297 Chr10 69655563 69662803 uncharacterized protein nan K02342

For more detailed data, you can explore the Download section to access the full dataset.