CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.2228 rna-evm.model.Chr10.2228 Chr10 67571616 67573464 PREDICTED: Putative uncharacterized transposon-derived protein F54H12.3 GO:0015074 K07497
gene-evm.TU.Chr10.223 rna-evm.model.Chr10.223 Chr10 7512023 7534250 uncharacterized protein nan nan
gene-evm.TU.Chr10.2231 rna-evm.model.Chr10.2231 Chr10 67575058 67576257 PREDICTED: Uncharacterized protein F54H12.2 GO:0055114 nan
gene-evm.TU.Chr10.2233 rna-evm.model.Chr10.2233 Chr10 67578003 67598682 PREDICTED: Sodium- and chloride-dependent glycine transporter 2 GO:0016020 K05038
gene-evm.TU.Chr10.2235 rna-evm.model.Chr10.2235.1 Chr10 67798302 67854422 uncharacterized protein nan K12335
gene-evm.TU.Chr10.2236 rna-evm.model.Chr10.2236 Chr10 67884734 67887151 PREDICTED: Protein GVQW3 nan K07499
gene-evm.TU.Chr10.2238 rna-evm.model.Chr10.2238 Chr10 68071066 68090822 PREDICTED: Alkaline phosphatase, tissue-nonspecific isozyme GO:0016791 K01077
gene-evm.TU.Chr10.2239 rna-evm.model.Chr10.2239 Chr10 68102263 68108320 PREDICTED: Transmembrane protein 209 nan K26471
gene-evm.TU.Chr10.2241 rna-evm.model.Chr10.2241 Chr10 68112441 68132014 PREDICTED: Transmembrane protein 209 nan K26153
gene-evm.TU.Chr10.2242 rna-evm.model.Chr10.2242 Chr10 68145393 68173643 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.