CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.2141 rna-evm.model.Chr10.2141 Chr10 64987311 64988398 PREDICTED: complement component 4 nan K16452
gene-evm.TU.Chr10.2142 rna-evm.model.Chr10.2142 Chr10 65004930 65076236 PREDICTED: Calcium-activated chloride channel regulator 4A nan K05030
gene-evm.TU.Chr10.2143 rna-evm.model.Chr10.2143 Chr10 65084079 65088002 PREDICTED: Uncharacterized protein KIAA1958 nan K04763
gene-evm.TU.Chr10.2145 rna-evm.model.Chr10.2145 Chr10 65143531 65166027 PREDICTED: Calcium-activated chloride channel regulator 4A nan K05027
gene-evm.TU.Chr10.2146 rna-evm.model.Chr10.2146 Chr10 65170634 65185286 PREDICTED: Glutathione S-transferase kappa 1 GO:0015035 K13299
gene-evm.TU.Chr10.2147 rna-evm.model.Chr10.2147 Chr10 65187869 65205439 PREDICTED: Cysteine-rich venom protein Mr30 nan K24834
gene-evm.TU.Chr10.2150 rna-evm.model.Chr10.2150 Chr10 65223289 65224228 uncharacterized protein nan nan
gene-evm.TU.Chr10.2152 rna-evm.model.Chr10.2152 Chr10 65244180 65244833 uncharacterized protein nan nan
gene-evm.TU.Chr10.2153 rna-evm.model.Chr10.2153 Chr10 65252877 65253530 uncharacterized protein nan nan
gene-evm.TU.Chr10.2155_evm.TU.Chr10.2156 rna-evm.model.Chr10.2155_evm.model.Chr10.2156 Chr10 65257462 65299737 PREDICTED: Contactin GO:0005515;GO:0007399;GO:0031175 K06760

For more detailed data, you can explore the Download section to access the full dataset.