CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.21 rna-evm.model.Chr10.21 Chr10 657473 657718 uncharacterized protein nan K07571
gene-evm.TU.Chr10.210 rna-evm.model.Chr10.210 Chr10 7151745 7171749 PREDICTED: DNA damage-binding protein 2 GO:0003684;GO:0005515;GO:0005634;GO:0006281;GO:0080008 K10140
gene-evm.TU.Chr10.2100 rna-evm.model.Chr10.2100 Chr10 64143228 64156151 PREDICTED: Nose resistant to fluoxetine protein 6 GO:0016747 K16568
gene-evm.TU.Chr10.2101 rna-evm.model.Chr10.2101 Chr10 64159505 64171161 uncharacterized protein nan nan
gene-evm.TU.Chr10.2102 rna-evm.model.Chr10.2102.1 Chr10 64181221 64196408 PREDICTED: Forkhead box protein J3 GO:0003700;GO:0006355;GO:0043565 K09403
gene-evm.TU.Chr10.2103 rna-evm.model.Chr10.2103 Chr10 64209638 64213249 PREDICTED: arginine-glutamic acid dipeptide repeats protein nan K05628
gene-evm.TU.Chr10.2104 rna-evm.model.Chr10.2104 Chr10 64260115 64338636 PREDICTED: Arginine-glutamic acid dipeptide repeats protein GO:0003682 K05628
gene-evm.TU.Chr10.2105 rna-evm.model.Chr10.2105 Chr10 64347092 64349005 PREDICTED: Complement C1q tumor necrosis factor-related protein 3 nan K24236
gene-evm.TU.Chr10.2109 rna-evm.model.Chr10.2109.1 Chr10 64376715 64378615 uncharacterized protein nan K23092
gene-evm.TU.Chr10.211 rna-evm.model.Chr10.211 Chr10 7173135 7187509 PREDICTED: Triosephosphate isomerase A GO:0004807 K01803

For more detailed data, you can explore the Download section to access the full dataset.