CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.2036 rna-evm.model.Chr10.2036 Chr10 62133912 62138395 PREDICTED: Arylsulfatase I GO:0008484 K01135
gene-evm.TU.Chr10.2037 rna-evm.model.Chr10.2037 Chr10 62144619 62163789 PREDICTED: Heat-stable enterotoxin receptor GO:0009190;GO:0016849;GO:0035556 K01769
gene-evm.TU.Chr10.2039 rna-evm.model.Chr10.2039 Chr10 62189916 62193093 uncharacterized protein nan K16778
gene-evm.TU.Chr10.204 rna-evm.model.Chr10.204 Chr10 6974902 7002274 PREDICTED: Protein enabled homolog GO:0008270 K05746
gene-evm.TU.Chr10.2040 rna-evm.model.Chr10.2040 Chr10 62272354 62333688 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.2041 rna-evm.model.Chr10.2041 Chr10 62301918 62303591 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.2043 rna-evm.model.Chr10.2043 Chr10 62393647 62395164 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.2044 rna-evm.model.Chr10.2044 Chr10 62403146 62404705 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr10.2045 rna-evm.model.Chr10.2045 Chr10 62458004 62459550 PREDICTED: Sex peptide receptor GO:0016020 K26200
gene-evm.TU.Chr10.2046 rna-evm.model.Chr10.2046 Chr10 62473410 62474919 PREDICTED: Sex peptide receptor GO:0016020 K26200

For more detailed data, you can explore the Download section to access the full dataset.