CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1921 rna-evm.model.Chr10.1921 Chr10 59090000 59102083 PREDICTED: Sodium/myo-inositol cotransporter GO:0016020;GO:0022857;GO:0055085 K14383
gene-evm.TU.Chr10.1923 rna-evm.model.Chr10.1923 Chr10 59181635 59200580 PREDICTED: Interferon-induced protein 44-like GO:0005525 K10429
gene-evm.TU.Chr10.1925 rna-evm.model.Chr10.1925 Chr10 59216405 59233350 uncharacterized protein nan K22289
gene-evm.TU.Chr10.1927 rna-evm.model.Chr10.1927 Chr10 59304637 59312261 uncharacterized protein nan nan
gene-evm.TU.Chr10.1928 rna-evm.model.Chr10.1928 Chr10 59314655 59319847 PREDICTED: Gamma-aminobutyric acid receptor-associated protein nan K08341
gene-evm.TU.Chr10.1929 rna-evm.model.Chr10.1929 Chr10 59325766 59333176 uncharacterized protein nan K13195
gene-evm.TU.Chr10.1930 rna-evm.model.Chr10.1930 Chr10 59346833 59352744 PREDICTED: polymeric immunoglobulin receptor nan K04149
gene-evm.TU.Chr10.1931 rna-evm.model.Chr10.1931 Chr10 59359589 59363185 PREDICTED: Cytidine deaminase nan K01489
gene-evm.TU.Chr10.1932 rna-evm.model.Chr10.1932 Chr10 59370261 59377627 PREDICTED: Ran guanine nucleotide release factor nan nan
gene-evm.TU.Chr10.1934 rna-evm.model.Chr10.1934 Chr10 59386187 59398786 PREDICTED: Migration and invasion-inhibitory protein GO:0010972;GO:0030336 K18204

For more detailed data, you can explore the Download section to access the full dataset.