CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.191 rna-evm.model.Chr10.191 Chr10 6693112 6693802 PREDICTED: organic solute transporter subunit alpha nan nan
gene-evm.TU.Chr10.1910 rna-evm.model.Chr10.1910 Chr10 58742115 58815793 PREDICTED: Sodium/myo-inositol cotransporter GO:0016020;GO:0022857;GO:0055085 K14391
gene-evm.TU.Chr10.1912 rna-evm.model.Chr10.1912 Chr10 58932223 58934832 uncharacterized protein nan nan
gene-evm.TU.Chr10.1913 rna-evm.model.Chr10.1913 Chr10 58934921 58936993 uncharacterized protein nan K04115
gene-evm.TU.Chr10.1914 rna-evm.model.Chr10.1914 Chr10 58939648 58940289 PREDICTED: Zinc finger protein 350 GO:0003676 K09191
gene-evm.TU.Chr10.1915 rna-evm.model.Chr10.1915 Chr10 58948730 58953612 uncharacterized protein nan nan
gene-evm.TU.Chr10.1916 rna-evm.model.Chr10.1916 Chr10 58963210 58967454 PREDICTED: Sodium/myo-inositol cotransporter GO:0016020;GO:0022857;GO:0055085 K14383
gene-evm.TU.Chr10.1918 rna-evm.model.Chr10.1918 Chr10 59072827 59073282 uncharacterized protein nan K09634
gene-evm.TU.Chr10.1919 rna-evm.model.Chr10.1919 Chr10 59074892 59076220 uncharacterized protein nan K04840
gene-evm.TU.Chr10.1920 rna-evm.model.Chr10.1920 Chr10 59083830 59087429 PREDICTED: Leucine-rich repeat-containing protein 71 nan K25450

For more detailed data, you can explore the Download section to access the full dataset.