CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.188 rna-evm.model.Chr10.188 Chr10 6468908 6472017 PREDICTED: tripartite motif-containing protein 2/3 GO:0008270 K12026
gene-evm.TU.Chr10.1880 rna-evm.model.Chr10.1880 Chr10 57796142 57803783 PREDICTED: Uncharacterized protein CXorf38 homolog nan K12805
gene-evm.TU.Chr10.1881 rna-evm.model.Chr10.1881 Chr10 57837557 57908139 PREDICTED: von Willebrand factor A domain-containing protein 8 GO:0005524;GO:0016887 K24512
gene-evm.TU.Chr10.1882 rna-evm.model.Chr10.1882 Chr10 57916875 57921511 PREDICTED: Protein gustavus GO:0005515 K10343
gene-evm.TU.Chr10.1883 rna-evm.model.Chr10.1883 Chr10 57963303 57968452 uncharacterized protein nan K17349
gene-evm.TU.Chr10.1884 rna-evm.model.Chr10.1884 Chr10 57970216 57973736 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr10.1885 rna-evm.model.Chr10.1885 Chr10 57981812 57997757 PREDICTED: Vigilin GO:0003676;GO:0003723 K21444
gene-evm.TU.Chr10.1886 rna-evm.model.Chr10.1886 Chr10 58012215 58017161 uncharacterized protein nan K10592
gene-evm.TU.Chr10.1887 rna-evm.model.Chr10.1887 Chr10 58027995 58030747 uncharacterized protein nan K10306
gene-evm.TU.Chr10.1888 rna-evm.model.Chr10.1888 Chr10 58034767 58036274 PREDICTED: DUF2939 domain-containing protein nan K21100

For more detailed data, you can explore the Download section to access the full dataset.