CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1870 rna-evm.model.Chr10.1870 Chr10 57640565 57646950 uncharacterized protein nan nan
gene-evm.TU.Chr10.1871 rna-evm.model.Chr10.1871 Chr10 57657695 57660938 PREDICTED: XK-related protein 6 GO:0016020 K26811
gene-evm.TU.Chr10.1872 rna-evm.model.Chr10.1872 Chr10 57669471 57677691 PREDICTED: solute carrier family 6 (neurotransmitter transporter, serotonin) member 4 nan K06846
gene-evm.TU.Chr10.1873 rna-evm.model.Chr10.1873 Chr10 57681941 57693105 PREDICTED: Cell division cycle-associated protein 3 nan K12088
gene-evm.TU.Chr10.1874 rna-evm.model.Chr10.1874 Chr10 57697578 57703567 PREDICTED: Cyclin N-terminal domain-containing protein 1 nan K05868
gene-evm.TU.Chr10.1875 rna-evm.model.Chr10.1875 Chr10 57709147 57711739 PREDICTED: PDZ and LIM domain protein Zasp GO:0005515 K19867
gene-evm.TU.Chr10.1876 rna-evm.model.Chr10.1876 Chr10 57714968 57716116 uncharacterized protein nan K13730
gene-evm.TU.Chr10.1877 rna-evm.model.Chr10.1877 Chr10 57716170 57720695 PREDICTED: NLR family CARD domain-containing protein 4 nan K12805
gene-evm.TU.Chr10.1878 rna-evm.model.Chr10.1878 Chr10 57724061 57789646 PREDICTED: NLR family CARD domain-containing protein 4 nan K22266
gene-evm.TU.Chr10.1879 rna-evm.model.Chr10.1879 Chr10 57789653 57790177 uncharacterized protein nan K10270

For more detailed data, you can explore the Download section to access the full dataset.