CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr10.1848 rna-evm.model.Chr10.1848 Chr10 56904421 56913110 uncharacterized protein nan K13978
gene-evm.TU.Chr10.185 rna-evm.model.Chr10.185 Chr10 6425330 6442048 PREDICTED: Beta-1,3-galactosyltransferase 6 GO:0006486;GO:0008378;GO:0016020 K00734
gene-evm.TU.Chr10.1850 rna-evm.model.Chr10.1850 Chr10 56913619 56914275 uncharacterized protein nan nan
gene-evm.TU.Chr10.1851 rna-evm.model.Chr10.1851 Chr10 56914333 56914887 uncharacterized protein GO:0000166;GO:0003677;GO:0003887;GO:0006260 K26723
gene-evm.TU.Chr10.1852 rna-evm.model.Chr10.1852 Chr10 56915140 56915853 uncharacterized protein nan K26723
gene-evm.TU.Chr10.1853 rna-evm.model.Chr10.1853 Chr10 56916755 56917411 uncharacterized protein nan K25503
gene-evm.TU.Chr10.1856 rna-evm.model.Chr10.1856 Chr10 56918732 56942040 PREDICTED: Sodium/myo-inositol cotransporter GO:0016020;GO:0022857;GO:0055085 K14391
gene-evm.TU.Chr10.1857 rna-evm.model.Chr10.1857 Chr10 56944466 56954338 PREDICTED: Leucine-rich repeat-containing protein 71 nan K25450
gene-evm.TU.Chr10.1859 rna-evm.model.Chr10.1859 Chr10 57043644 57048620 uncharacterized protein nan K11547
gene-evm.TU.Chr10.186 rna-evm.model.Chr10.186 Chr10 6441778 6454614 PREDICTED: Ubiquitin-conjugating enzyme E2 J2 nan K04554

For more detailed data, you can explore the Download section to access the full dataset.